Genefinding, Promoter regions & Splice Site Prediction Tools

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This page was originally found at: http://www-mbi3.kuicr.kyoto-u.ac.jp/~kihara/biolink/genefind.html. I use it so much that I made a copy here on http://syntom.cit.cornell.edu .

Genefinding Tools

• NCBI ORF Finder
• BCM gene finder
• DNA sequence translation (Identification of ORF)
• EcoParse
• FramePlot
• Genefinder
• GenLang
• GeneMark
• GeneParser
• Genie
• GENSCAN
• GenView
• Glimmer(Hidden Markov Model)
• GRAIL
• NetGene
• NetPlantGene
• OC1
• NCBI ORF Finder
• ORFGene
• ORFSeeker
• ORNL
• pebles
• PROCRUSTES
• RecSta
• veil
• WebGene

Promoter Predictions

• Promoter Prediction
• Proscan

Splice Site Predictions

• Splice Site Prediction
• SpliceView

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Last Modified: 29 September 1997
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